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- G.I. Joe vs. the Transformers, by Michael Higgins, Larry Hama ; pencils by Herb Trimpe [and others] ; inks by Vince Colletta [and others] ; letters by Joe Rosen [and others] ; colors by Nel Yomtov [and others], 1
- John Byrne's Next Men, the premiere collection : volume 2, [story and art by John Byrne ; colored by Matt Webb ; series edited by Barbara Kesel ; collection edited by Justin Eisinger ; collection design and production by Neil Uyetake]
- Teenage Mutant Ninja Turtles, adaptation by Justin Eisinger ; edits by Alonzo Simon ; lettering and design by Tom B. Long, Volume 4
- Star Trek archives, [collection edits by Justin Eisinger ; written by Peter David, Bill Mumy ; pencils by Curt Swan, Gordon Purcell], Volume 1
- Teenage Mutant Ninja Turtles, [written by Joshua Sternin & J.R. Ventimilia ; adaptation by Justin Eisinger ; edits by Alonzo Simon ; lettering and design by Tom B. Long], Volume 3
- The Transformers classics, cover art by Guido Guidi ; collection edits by Justin Eisinger & Alonzo Simon ; introduction, editorial notes and assistance by Mark W. Bellomo, Vol. 7
- The magic begins, written by Lauren Faust ; adaptation by Justin Eisinger ; Edits by Alonzo Simon ; lettering and design by Tom B. Long
- Nos llamaron enemigo, escrito por George Takei, Justin Eisinger, Steve Scott ; ilustrado por Harmony Becker ; [traducido por Lawrence Schimel]
- My Little Pony, story by Meghan McCarthy ; adaptation by Justin Eisinger ; lettering and design by Gilberto Lazcano
- My little pony, story by Josh Haber ; adaptation by Justin Eisinger ; lettering and design by Gilberto Lazcano
- They called us enemy, written by George Takei, Justin Eisinger & Steven Scott ; art by Harmony Becker
- To where and back again, story by Josh Haber ; adaptation by Justin Eisinger ; edits by Alonzo Simon ; lettering and design by Gilbert Lazcano
- They called us enemy, George Takei, Justin Eisinger, Steve Scott ; art by Harmony Becker
- Powerpuff Girls, [front cover art by Derek Charm ; back cover art by Phil Moy ; collection edits by Justin Eisinger & Alonzo Simon], Volume 2
- Transformers, [story by Simon Furman ; pencils by Guido Guidi and Joe Ng ; inks by Elaine To, Ferd Poblete, and Rob Armstrong ; colors by David Cheung [and others] ; lettering by Ben Lee ; collection edited by Justin Eisinger], Volume 1
- Dirk Gently's Holistic Detective Agency, [the interconnectedness of all kings], written by Chris Ryall ; pencils by Tony Akins & Ilias Kyriazis ; inks by John Livesay ; colors by Leonard O'Grady ; additional inks by Tony Akins, Bob Wiacek ; letters by Robbie Robbins & Shawn Lee
- The Transformers, the IDW collection, [collection edits by Justin Eisinger], Volume 1
- The Powerpuff Girls classics, cover by Phil Moy ; cover colors by Jason Lewis ; collection edits by Justin Eisinger & Alonzo Simon ; collection design by Neil Uyetake ; PowerPuff Girls created by Craig McCracken, Volume 3
- My Little Pony, story by Josh Haber ; adaptation by Justin Eisinger ; edits by Alonzo Simon ; lettering and design by Gilberto Lazcano, Vol. 10
- My little pony, Friends forever, cover by Andy Price ; series edits by Bobby Curnow ; collection edits by Justin Eisinger & Alonzo Simon ; collection design by Neil Uyetake, 1
- Transformers animated, adaptation by Zachary Rau ; edits by Justin Eisinger ; letters and design by Tom B. Long, Volume 11
- My little pony, Twilight's kingdom, written by Meghan McCarthy ; adaptation by Justin Eisinger
- My little pony, Twilight's kingdom, written by Meghan McCarthy ; adaptation by Justin Eisinger ; edits by Alonzo Simon ; lettering and design by Gilberto Lazcano
- My little pony, shadowplay, story by Josh Haber ; adaptation by Justin Eisinger ; lettering and design by Nathan Widick
- G.I. Joe, with foreword by Mark W. Bellomo; editors, Justin Eisinger, Alonzo Simon; designer, Shawn Lee, 001
- My little pony, story by Kristine Songco and Joanna Lewis ; adaptation by Justin Eisinger ; edits by Alonzo Simon ; lettering and design by Tom B. Long, 13
- Teenage Mutant Ninja Turtles, adaptation by Justin Eisinger ; edits by Alonzo Simon ; lettering and design by Tom B. Long, Volume 4
- My little pony, shadowplay, story by Josh Haber ; adaptation by Justin Eisinger ; lettering and design by Nathan Widick
- Teenage Mutant Ninja Turtles, [written by Joshua Sternin & J.R. Ventimilia ; adaptation by Justin Eisinger ; edits by Alonzo Simon ; lettering and design by Tom B. Long], Volume 3
- Nos llamaron enemigo, escrito por George Takei, Justin Eisinger, Steve Scott ; ilustrado por Harmony Becker ; [traducido por Lawrence Schimel]
- They called us enemy, written by George Takei, Justin Eisinger & Steven Scott ; art by Harmony Becker
- They called us enemy, George Takei, Justin Eisinger, Steve Scott ; art by Harmony Becker
- My little pony, Twilight's kingdom, written by Meghan McCarthy ; adaptation by Justin Eisinger